Difference between revisions of "Summary"

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'''Enhance Business Growth- Skilled Live Chat Service Provider'''
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[[File:HomePageListeriomics.png|thumb|300px|right|Home page of the Listeriomics website]]
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Live Chat Service is the most ideal way in the manner by which the organization can boost goodwill in the right manner. Thus creating a better customer/client experience hence enhancing the Business. Computerized automated chat-bots are prone to dominate their human partners. There are sure things that mechanized frameworks need. But there are tons of things and tasks that the software can do more faster and efficiently, as compared to humans. What matters in the end is all about delivering results, for which both human and machine are equipped. For an online business, a Live Chat Service Provider is a great choice to look for better results.
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Listeriomics integrates all complete genomes, transcriptomes and proteomes published for <i>Listeria</i> species to date. It allows navigating among all these datasets with enriched metadata in a user-friendly format.
  
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While choosing the [https://deskmoz.com/ Live Chat Service Provider] one should be very selective towards the correct choice that can help in the business growth. Its advisable to conduct few initial training/interview sessions before choosing the right Live Chat Service Providers. It is also recommended to opt for those who are having great typing speed and have command over their language, as it would be the greatest tool for them while interacting with your clients/customers.
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The main purpose of the website is to give scientists a quick and easy access to tools created for answering the four questions one has when starting a study on a specific genomic element:
 +
# What are the known functions of a genomic feature in a given strain and homologies in closely related strains?
 +
# What are the biological conditions in which a genomic feature is transcribed?
 +
# What are the biological conditions in which a genomic feature is translated?
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# What is the regulation network involved with a genomic feature of interest?
  
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Live Chat Service Provider with good command on language and quick enough with their typing would more likely to attend your customers/clients more efficiently. it allows the chat agents to make a productive conversation with the customers and provide them with the solution for all their queries in no time. In order to add on live chat service to your Business, look for chat agents who can understand about your business and have knowledge about your products and services.  
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The website integrates different type of tools for “omics” data analyses:
 +
* A highly interactive genome viewer for display of gene expression arrays, tiling arrays, and RNA-Seq datasets along with proteomics and genomics datasets.
 +
* Expression and protein atlas, which are tools to connect every genomic feature (genes, smallRNAs, antisenseRNAs) or proteins to the most relevant “omics” data.
 +
* A tool to explore gene conservation throughout ''Listeria'' strains.
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* A co-expression network tool to discover new potential regulation.
  
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If the online organization is having a strong base of the customers then they can easily coordinate with the upcoming challenges. To know more about the skilled chat agents, then one should make sure you give a look at the site carefully https://deskmoz.com/
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Click Here For More Information:- [https://deskmoz.com/uk Live Chat Agents]
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= Tutorials =
 +
 
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{| class="wikitable"
 +
|-
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| [[First hands on Listeriomics]]
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| General organization of the website and principal features
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|}
 +
 
 +
=== Tools ===
 +
 
 +
{| class="wikitable"
 +
|-
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| [[Genomic tools]]
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| How-to access all the genomes.
 +
|-
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| [[Gene tools]]
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| How-to access a specific gene and get information about its annotation, its conservation, its transcription or translation.
 +
|-
 +
| [[Small RNA tools]]
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| How-to access a specific Small RNA
 +
|-
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| [[Transcriptomic tools]]
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| How-to access transcriptomic dataset and display it or perform an analysis with the expression atlas
 +
|-
 +
| [[Proteomic tools]]
 +
| How-to access proteomic dataset and display it or perform an analysis with the protein atlas
 +
|-
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| [[Co-Expression_network_tools|Co-expression network tools]]
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| How-to access to the co-expression network and search for potential co-regulation of genomic feature
 +
|-
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| [[Submit_Data|Submit your datasets]]
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| How-to access to the submit section of Listeriomics in which you can inform us of important database update to make
 +
|}
 +
 
 +
=== Viewers ===
 +
 
 +
{| class="wikitable"
 +
|-
 +
| [[Genome viewer]]
 +
| How-to use the genome viewer for visualizing "omics" datasets
 +
|-
 +
| [[Transcriptomic HeatMap viewer]]
 +
| How-to use the transcriptomic heatmap viewer and decipher differently expressed genomic features
 +
|-
 +
| [[Proteomic HeatMap viewer]]
 +
| How-to use the proteomic heatmap viewer and decipher detected protein in every proteomic experiment
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|}
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= Database =
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The Listeriomics database includes all complete genomes, transcriptomes and proteomes published on ''Listeria'' species to date. It allows scientists to analyse dynamically all these datasets in a user-friendly format, and can be used by bio-informaticians as a central database for systems biology analysis.
 +
 
 +
List of data available:
 +
* 83 Listeria complete genomes
 +
* 492 transcriptome datasets
 +
* 74 proteome datasets
 +
 
 +
The whole database can be downloaded [http://listeriomics01.hosting.pasteur.fr/DatabaseListeriomics.zip Here]
 +
 
 +
= Screenshots =
 +
<gallery widths=200px>
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Image:BHIViewer.png|Genome viewer
 +
Image:GenomeviewerChangeView.png|Example of the zoom capability of the Genome Viewer
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Image:genomes.png|Genome webpage
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Image:Genepanel.png|Gene webpage
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Image:Synteny.png|Synteny webpage
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Image:smallRNA.png|Small RNA webpage
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Image:transcriptome.png|Transcriptome webpage
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Image:Heatmap.png|Heatmap visualization of transcriptomics datasets
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Image:proteome.png|Proteome webpage
 +
Image:HeatmapProteomic.png|Heatmap visualization of proteomics datasets
 +
Image:SeqInfo.png|Sequence information panel
 +
Image:coexpression.png|Co-expression network webpage
 +
</gallery>

Latest revision as of 14:01, 29 November 2022

Home page of the Listeriomics website

Listeriomics integrates all complete genomes, transcriptomes and proteomes published for Listeria species to date. It allows navigating among all these datasets with enriched metadata in a user-friendly format.

The main purpose of the website is to give scientists a quick and easy access to tools created for answering the four questions one has when starting a study on a specific genomic element:

  1. What are the known functions of a genomic feature in a given strain and homologies in closely related strains?
  2. What are the biological conditions in which a genomic feature is transcribed?
  3. What are the biological conditions in which a genomic feature is translated?
  4. What is the regulation network involved with a genomic feature of interest?

The website integrates different type of tools for “omics” data analyses:

  • A highly interactive genome viewer for display of gene expression arrays, tiling arrays, and RNA-Seq datasets along with proteomics and genomics datasets.
  • Expression and protein atlas, which are tools to connect every genomic feature (genes, smallRNAs, antisenseRNAs) or proteins to the most relevant “omics” data.
  • A tool to explore gene conservation throughout Listeria strains.
  • A co-expression network tool to discover new potential regulation.


Tutorials[edit]

First hands on Listeriomics General organization of the website and principal features

Tools[edit]

Genomic tools How-to access all the genomes.
Gene tools How-to access a specific gene and get information about its annotation, its conservation, its transcription or translation.
Small RNA tools How-to access a specific Small RNA
Transcriptomic tools How-to access transcriptomic dataset and display it or perform an analysis with the expression atlas
Proteomic tools How-to access proteomic dataset and display it or perform an analysis with the protein atlas
Co-expression network tools How-to access to the co-expression network and search for potential co-regulation of genomic feature
Submit your datasets How-to access to the submit section of Listeriomics in which you can inform us of important database update to make

Viewers[edit]

Genome viewer How-to use the genome viewer for visualizing "omics" datasets
Transcriptomic HeatMap viewer How-to use the transcriptomic heatmap viewer and decipher differently expressed genomic features
Proteomic HeatMap viewer How-to use the proteomic heatmap viewer and decipher detected protein in every proteomic experiment

Database[edit]

The Listeriomics database includes all complete genomes, transcriptomes and proteomes published on Listeria species to date. It allows scientists to analyse dynamically all these datasets in a user-friendly format, and can be used by bio-informaticians as a central database for systems biology analysis.

List of data available:

  • 83 Listeria complete genomes
  • 492 transcriptome datasets
  • 74 proteome datasets

The whole database can be downloaded Here

Screenshots[edit]

  • Genome viewer

  • Example of the zoom capability of the Genome Viewer

  • Genome webpage

  • Gene webpage

  • Synteny webpage

  • Small RNA webpage

  • Transcriptome webpage

  • Heatmap visualization of transcriptomics datasets

  • Proteome webpage

  • Heatmap visualization of proteomics datasets

  • Sequence information panel

  • Co-expression network webpage

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